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These tables were taken from the cup final programme of 2000 so were not completely up to date. Actual final tables not known
Premier Division
| team | pld | w | d | l | f | a | pts |
| Chelmsford City | 16 | 12 | 2 | 2 | 76 | 19 | 35 |
| Pye | 16 | 11 | 2 | 3 | 73 | 31 | 35 |
| Stalham Knights | 16 | 9 | 4 | 3 | 61 | 24 | 31 |
| Colchester United | 16 | 10 | 0 | 6 | 55 | 40 | 30 |
| UG Sports | 16 | 8 | 1 | 7 | 45 | 43 | 25 |
| Luton Women's | 16 | 7 | 2 | 7 | 28 | 38 | 23 |
| Norwich City | 16 | 3 | 2 | 11 | 28 | 50 | 11 |
| Norwich United | 16 | 3 | 2 | 11 | 20 | 62 | 11 |
| Bishop's Stortford | 16 | 1 | 1 | 14 | 17 | 98 | 4 |
Division One
| team | pld | w | d | l | f | a | pts |
| Royston Town | 18 | 11 | 4 | 3 | 40 | 21 | 37 |
| Kings Lynn | 18 | 11 | 2 | 5 | 48 | 19 | 35 |
| Cambridge United | 18 | 11 | 3 | 4 | 63 | 29 | 36 |
| Haverhill Rovers | 18 | 10 | 3 | 5 | 46 | 14 | 34 |
| Cambridge Academicals | 17 | 11 | 3 | 3 | 44 | 22 | 36 |
| Stanway | 17 | 7 | 2 | 8 | 31 | 27 | 23 |
| Northampton T & County Res. | 17 | 7 | 0 | 10 | 28 | 39 | 21 |
| Huntingdon | 17 | 4 | 1 | 12 | 25 | 54 | 13 |
| Bedford Town Bells Res. | 18 | 2 | 2 | 14 | 11 | 71 | 8 |
| Cottenham | 17 | 3 | 0 | 14 | 25 | 74 | 6* |
Division Two North
| team | pld | w | d | l | f | a | pts |
| Woodbridge Town | 14 | 12 | 2 | 0 | 80 | 7 | 38 |
| The Hollies | 14 | 10 | 0 | 4 | 67 | 36 | 30 |
| Corton Ladies | 14 | 9 | 1 | 4 | 76 | 36 | 28 |
| Attleborough Racers Res. | 14 | 8 | 2 | 4 | 66 | 24 | 26 |
| Norwich City Res. | 14 | 7 | 1 | 6 | 59 | 23 | 22 |
| Sax Sports | 14 | 2 | 1 | 11 | 25 | 92 | 7 |
| Yarmouth Town | 14 | 2 | 1 | 11 | 39 | 84 | 7 |
| Stalham Knights Res. | 14 | 2 | 0 | 12 | 17 | 131 | 6 |
Division Two South
| team | pld | w | d | l | f | a | pts |
| Saffron Walden Town | 16 | 14 | 2 | 0 | 73 | 13 | 44 |
| Mill Hill United | 16 | 12 | 1 | 3 | 58 | 13 | 37 |
| Wisbech | 16 | 10 | 4 | 2 | 50 | 19 | 34 |
| Old Southendians | 16 | 7 | 3 | 6 | 36 | 24 | 24 |
| Stevenage Vixens | 16 | 6 | 3 | 7 | 30 | 32 | 21 |
| Stevenage Borough | 16 | 4 | 4 | 8 | 40 | 45 | 16 |
| Cambridge United Res. | 16 | 5 | 1 | 10 | 35 | 49 | 16 |
| AFC Sudbury | 16 | 3 | 3 | 10 | 26 | 39 | 12 |
| Symonds Green | 16 | 0 | 1 | 15 | 12 | 126 | 0* |
* = Points deducted